TSS: Mm 7583.1: Difference between revisions
From referenceTSS
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|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=NA | ||
|distance_to_tss=20997 | |distance_to_tss=20997 | ||
|end=125414736 | |end=125414736 | ||
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|entrez_id=74117 | |entrez_id=74117 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
|gene_alias=1200003A09Rik | |gene_alias=1200003A09Rik{{!}}Arp3 | ||
|gene_description=ARP3 actin-related protein 3 | |gene_description=ARP3 actin-related protein 3 | ||
|gene_name=Actr3 | |gene_name=Actr3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000026341 | |nearest_ensembl=ENSMUSG00000026341 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001205385 | ||
|nearest_refseq=NM_023735 | |nearest_refseq=NM_023735 | ||
|nearest_unigene=Mm.183102 | |nearest_unigene=Mm.183102 | ||
| Line 22: | Line 22: | ||
|start_of_center_position=125414729 | |start_of_center_position=125414729 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=4(GAGTTTAAAGGG,-,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 19:00, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 20997 |
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| Nearest PromoterID: | NM_001205385 |
| Entrez ID: | 74117 |
| Nearest Unigene: | Mm.183102 |
| Nearest Refseq: | NM_023735 |
| Nearest Ensembl: | ENSMUSG00000026341 |
| Gene Name: | Actr3 |
| Gene Alias: | 1200003A09Rik|Arp3 |
| Gene Description: | ARP3 actin-related protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 4(GAGTTTAAAGGG,-,0.00) |