TSS: Mm 75990.1: Difference between revisions
From referenceTSS
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|Eps15-rs= | |Eps15-rs= | ||
|Eps15R= | |Eps15R= | ||
|all_trans=AK177804:83 | |all_trans=LF300400:-15 MA535977:-15 AK177804:83 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |distance=-15 | ||
|distance_to_tss=34436 | |distance_to_tss=34436 | ||
|end=72387055 | |end=72387055 | ||
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|entrez_id=13859 | |entrez_id=13859 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
|gene_alias=9830147J04Rik | |gene_alias=9830147J04Rik{{!}}AI593686{{!}}Eps15-rs{{!}}Eps15R | ||
|gene_description=epidermal growth factor receptor pathway substrate 15-like 1 | |gene_description=epidermal growth factor receptor pathway substrate 15-like 1 | ||
|gene_id=13859 | |gene_id=13859 | ||
|gene_name= | |gene_name=Eps15l1 | ||
|gene_source=MGI:104582 | |gene_source=MGI:104582 | ||
|gene_symbol=Eps15l1 | |gene_symbol=Eps15l1 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=MGI:104582 | |hgnc_mgi_id=MGI:104582 | ||
|nearest_ensembl=ENSMUSG00000006276 | |nearest_ensembl=ENSMUSG00000006276 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_007944 | ||
|nearest_refseq=NM_007944 | |nearest_refseq=NM_007944 | ||
|nearest_unigene=Mm.288894 | |nearest_unigene=Mm.288894 | ||
|num_trans= | |num_trans=3 | ||
|species=mouse | |species=mouse | ||
|start=72387020 | |start=72387020 | ||
|start_of_center_position=72387037 | |start_of_center_position=72387037 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=22(CCCTCTAAGAGG,-,0.00) | ||
|transcript_name= | |transcript_name=LF300400 MA535977 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_75990.1 | |tss_id=mm_75990.1 | ||
Latest revision as of 19:04, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 34436 |
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| Nearest PromoterID: | NM_007944 |
| Entrez ID: | 13859 |
| Nearest Unigene: | Mm.288894 |
| Nearest Refseq: | NM_007944 |
| Nearest Ensembl: | ENSMUSG00000006276 |
| Gene Name: | Eps15l1 |
| Gene Alias: | 9830147J04Rik|AI593686|Eps15-rs|Eps15R |
| Gene Description: | epidermal growth factor receptor pathway substrate 15-like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 22(CCCTCTAAGAGG,-,0.00) |
TSS expression
Expression data not found.