TSS: Mm 77149.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|D8Bwg1320e= | |D8Bwg1320e= | ||
|all_trans=ENSMUST00000173521.1:0 AK029820:0 AK014649:0 | |all_trans=ENSMUST00000173521.1:0 NM_027570:0 AK029820:0 AK014649:0 BC055443:4 AY092768:4 BC039155:8 ENSMUST00000070004.3:-30 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=1 | ||
|end=111630344 | |end=111630344 | ||
|end_of_center_position=111630335 | |end_of_center_position=111630335 | ||
|entrez_id=52815 | |entrez_id=52815 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=4733401P21Rik | |gene_alias=4733401P21Rik{{!}}D8Bwg1320e{{!}}DLD | ||
|gene_description=lactate dehydrogenase D | |gene_description=lactate dehydrogenase D | ||
|gene_id=52815 | |gene_id=52815 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_027570 | |nearest_refseq=NM_027570 | ||
|nearest_unigene=Mm.27589 | |nearest_unigene=Mm.27589 | ||
|num_trans= | |num_trans=8 | ||
|species=mouse | |species=mouse | ||
|start=111630325 | |start=111630325 | ||
|start_of_center_position=111630334 | |start_of_center_position=111630334 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000173521.1 AK029820 AK014649 | |transcript_name=ENSMUST00000173521.1 NM_027570 AK029820 AK014649 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_77149.1 | |tss_id=mm_77149.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9D635 | |uniprot_id=Q7TNG8 Q9D635 | ||
}} | }} | ||
Revision as of 19:30, 21 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_027570 |
| Entrez ID: | 52815 |
| Nearest Unigene: | Mm.27589 |
| Nearest Refseq: | NM_027570 |
| Nearest Ensembl: | ENSMUSG00000031958 |
| Gene Name: | lactate dehydrogenase D |
| Gene Alias: | 4733401P21Rik|D8Bwg1320e|DLD |
| Gene Description: | lactate dehydrogenase D |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.