TSS: Mm 77879.1: Difference between revisions
From referenceTSS
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|MMP-13= | |MMP-13= | ||
|Mmp1= | |Mmp1= | ||
|all_trans=AK150728:0 AK151626:0 AK152916:0 AK155188:0 AK153458:0 AK152507:0 AK159921:0 AK160819:0 ENSMUST00000015394. | |all_trans=AK150728:0 AK151626:0 AK152916:0 AK155188:0 AK153458:0 AK152507:0 AK159921:0 AK160819:0 ENSMUST00000015394.9:-7 NM_008607:-7 BC125320:-7 BC125322:-7 X66473:8 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
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|entrez_id=17386 | |entrez_id=17386 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
|gene_alias=Clg | |gene_alias=Clg{{!}}MMP-13{{!}}Mmp1 | ||
|gene_description=matrix metallopeptidase 13 | |gene_description=matrix metallopeptidase 13 | ||
|gene_id=17386 | |gene_id=17386 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_008607 | |nearest_refseq=NM_008607 | ||
|nearest_unigene=Mm.5022 | |nearest_unigene=Mm.5022 | ||
|num_trans= | |num_trans=13 | ||
|species=mouse | |species=mouse | ||
|start=7272520 | |start=7272520 | ||
Revision as of 19:46, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 15 |
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| Nearest PromoterID: | NM_008607 |
| Entrez ID: | 17386 |
| Nearest Unigene: | Mm.5022 |
| Nearest Refseq: | NM_008607 |
| Nearest Ensembl: | ENSMUSG00000050578 |
| Gene Name: | matrix metallopeptidase 13 |
| Gene Alias: | Clg|MMP-13|Mmp1 |
| Gene Description: | matrix metallopeptidase 13 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.