TSS: Mm 77971.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF305026:-288 MA540603:-288 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=-288 | ||
|distance_to_tss=8915 | |distance_to_tss=8915 | ||
|end=7793312 | |end=7793312 | ||
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|entrez_id=100885830 | |entrez_id=100885830 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
|gene_alias=Gm23685 | |gene_alias=Gm23685{{!}}mmu-mir-5618 | ||
|gene_description=microRNA 5618 | |gene_description=microRNA 5618 | ||
|gene_name=Mir5618 | |gene_name=Mir5618 | ||
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|nearest_refseq=NR_049191 | |nearest_refseq=NR_049191 | ||
|nearest_unigene= | |nearest_unigene= | ||
|num_trans= | |num_trans=2 | ||
|species=mouse | |species=mouse | ||
|start=7793297 | |start=7793297 | ||
|start_of_center_position=7793304 | |start_of_center_position=7793304 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=LF305026 MA540603 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_77971.1 | |tss_id=mm_77971.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 19:48, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 8915 |
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| Nearest PromoterID: | NR_049191 |
| Entrez ID: | 100885830 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_049191 |
| Nearest Ensembl: | ENSMUSG00000093615 |
| Gene Name: | Mir5618 |
| Gene Alias: | Gm23685|mmu-mir-5618 |
| Gene Description: | microRNA 5618 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |