TSS: Mm 80147.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=NA | ||
|distance_to_tss=20664 | |distance_to_tss=20664 | ||
|end=70914164 | |end=70914164 | ||
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|entrez_id=15450 | |entrez_id=15450 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=AI256194 | |gene_alias=AI256194{{!}}HL{{!}}Hpl | ||
|gene_description= | |gene_description=lipase, hepatic | ||
|gene_name=Lipc | |gene_name=Lipc | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 23: | Line 23: | ||
|start_of_center_position=70914144 | |start_of_center_position=70914144 | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box=-93(GCTTTTAAATGA,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 20:37, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 20664 |
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| Nearest PromoterID: | NM_008280 |
| Entrez ID: | 15450 |
| Nearest Unigene: | Mm.390187 |
| Nearest Refseq: | NM_008280 |
| Nearest Ensembl: | ENSMUSG00000032207 |
| Gene Name: | Lipc |
| Gene Alias: | AI256194|HL|Hpl |
| Gene Description: | lipase, hepatic |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -93(GCTTTTAAATGA,+,0.00) |