TSS: Mm 82072.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|Zfp167=
|Zfp167=
|all_trans=NM_001370967:-46 NM_001353989:-46 ENSMUST00000214957.1:-48
|chr=chr9
|chr=chr9
|cpg_percent=0.065
|cpg_percent=0.065
|distance=
|distance=-46
|distance_to_tss=14830
|distance_to_tss=53
|end=122903308
|end=122903308
|end_of_center_position=122903301
|end_of_center_position=122903301
|entrez_id=382118
|entrez_id=NA
|gc_percent=0.636816
|gc_percent=0.636816
|gene_alias=BC042569
|gene_alias=
|gene_description=zinc finger with KRAB and SCAN domains 7
|gene_description=
|gene_name=Zkscan7
|gene_id=666257
|gene_type=protein-coding
|gene_name=zinc finger protein 660
|nearest_ensembl=ENSMUSG00000063488
|gene_source=MGI:3645415
|nearest_promoter_id=NM_001177505
|gene_symbol=Zfp660
|nearest_refseq=NM_001177505
|gene_synonyms=Gm8008
|nearest_unigene=Mm.86999
|gene_type=
|num_trans=0
|hgnc_mgi_id=MGI:3645415
|nearest_ensembl=
|nearest_promoter_id=NM_001370967
|nearest_refseq=
|nearest_unigene=
|num_trans=3
|species=mouse
|species=mouse
|start=122903293
|start=122903293
|start_of_center_position=122903300
|start_of_center_position=122903300
|strand=+
|strand=+
|transcript_name=
|transcript_name=NM_001370967 NM_001353989
|tss_classification=no
|tss_classification=no
|tss_id=mm_82072.1
|tss_id=mm_82072.1
|tss_score=1
|tss_score=1
|uniprot_id=
}}
}}

Revision as of 21:20, 21 June 2021

Basic information about the TSS


TSS ID:mm_82072.1
Species:mouse
Chr:chr9
Start:122903293
End:122903308
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:NM_001370967 NM_001353989
Distance:-46
GeneID:666257
HGNC/MGI_ID:MGI:3645415
UniProt_ID:
Gene_name:zinc finger protein 660
Gene_symbol:Zfp660
Gene_synonyms:Gm8008
Gene_source:MGI:3645415



TATA-Box annotation


Distance to TSS:53
Nearest PromoterID:NM_001370967
Entrez ID:NA
Nearest Unigene:
Nearest Refseq:
Nearest Ensembl:
Gene Name:zinc finger protein 660
Gene Alias:
Gene Description:
Gene Type:
CpG%:0.065
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.