TSS: Mm 97038.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENSMUST00000151440.7:0 ENSMUST00000146233.7:0 ENSMUST00000140842.8:0 ENSMUST00000094041.3:0 ENSMUST00000142921.1 | |all_trans=ENSMUST00000151440.7:0 ENSMUST00000146233.7:0 ENSMUST00000140842.8:0 ENSMUST00000094041.3:0 ENSMUST00000142921.1:0 NM_001291153:0 NM_001037713:0 AK046736:0 AK140315:0 BC146440:4 BC153050:4 MN366017:7 MN366018:7 MN366019:7 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
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|hgnc_mgi_id=MGI:3772572 | |hgnc_mgi_id=MGI:3772572 | ||
|nearest_ensembl=ENSMUSG00000040483 | |nearest_ensembl=ENSMUSG00000040483 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001291153 | ||
|nearest_refseq=NM_001037713 | |nearest_refseq=NM_001037713 | ||
|nearest_unigene=Mm.291131 | |nearest_unigene=Mm.291131 | ||
|num_trans= | |num_trans=14 | ||
|species=mouse | |species=mouse | ||
|start=72301613 | |start=72301613 | ||
|start_of_center_position=72301642 | |start_of_center_position=72301642 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000151440.7 ENSMUST00000146233.7 ENSMUST00000140842.8 ENSMUST00000094041.3 ENSMUST00000142921.1 NM_001037713 | |transcript_name=ENSMUST00000151440.7 ENSMUST00000146233.7 ENSMUST00000140842.8 ENSMUST00000094041.3 ENSMUST00000142921.1 NM_001291153 NM_001037713 AK046736 AK140315 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_97038.1 | |tss_id=mm_97038.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=F6ZMN8 Q5NBU8 | |uniprot_id=F6ZMN8 Q5NBU8 Z4YN17 | ||
}} | }} | ||
Revision as of 02:57, 22 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 13 |
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| Nearest PromoterID: | NM_001291153 |
| Entrez ID: | 327959 |
| Nearest Unigene: | Mm.291131 |
| Nearest Refseq: | NM_001037713 |
| Nearest Ensembl: | ENSMUSG00000040483 |
| Gene Name: | XIAP associated factor 1 |
| Gene Alias: | Fbox39 |
| Gene Description: | XIAP associated factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.