TSS: Mm 97096.1: Difference between revisions
From referenceTSS
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|AW260459= | |AW260459= | ||
|Carkl= | |Carkl= | ||
|all_trans=ENSMUST00000131927.8:0 ENSMUST00000006105.6:0 NM_029031 | |all_trans=ENSMUST00000131927.8:0 ENSMUST00000006105.6:0 NM_029031:0 AK015273:0 AK171027:0 BC054721:0 BC056433:0 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 12: | Line 12: | ||
|entrez_id=74637 | |entrez_id=74637 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
|gene_alias=4930431K22Rik | |gene_alias=4930431K22Rik{{!}}AI194947{{!}}AW260459{{!}}Carkl | ||
|gene_description=sedoheptulokinase | |gene_description=sedoheptulokinase | ||
|gene_id=74637 | |gene_id=74637 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_029031 | |nearest_refseq=NM_029031 | ||
|nearest_unigene=Mm.200905 | |nearest_unigene=Mm.200905 | ||
|num_trans= | |num_trans=7 | ||
|species=mouse | |species=mouse | ||
|start=73199445 | |start=73199445 | ||
|start_of_center_position=73199472 | |start_of_center_position=73199472 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000131927.8 ENSMUST00000006105.6 NM_029031 | |transcript_name=ENSMUST00000131927.8 ENSMUST00000006105.6 NM_029031 AK015273 AK171027 BC054721 BC056433 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_97096.1 | |tss_id=mm_97096.1 | ||
Revision as of 02:58, 22 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -9 |
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| Nearest PromoterID: | NM_029031 |
| Entrez ID: | 74637 |
| Nearest Unigene: | Mm.200905 |
| Nearest Refseq: | NM_029031 |
| Nearest Ensembl: | ENSMUSG00000005951 |
| Gene Name: | sedoheptulokinase |
| Gene Alias: | 4930431K22Rik|AI194947|AW260459|Carkl |
| Gene Description: | sedoheptulokinase |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.