TSS: Hg 233013.1: Difference between revisions
From referenceTSS
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|distance=19 | |distance=19 | ||
|distance_to_tss=52 | |distance_to_tss=52 | ||
|end= | |end=47579010 | ||
|end_of_center_position=47579010 | |end_of_center_position=47579010 | ||
|entrez_id=55626 | |entrez_id=55626 | ||
| Line 25: | Line 25: | ||
|num_trans=24 | |num_trans=24 | ||
|species=human | |species=human | ||
|start= | |start=47579009 | ||
|start_of_center_position=47579009 | |start_of_center_position=47579009 | ||
|strand= | |strand=+ | ||
|tata_box=32(GTTTTTATGGTA,+,0.00) | |tata_box=32(GTTTTTATGGTA,+,0.00) | ||
|transcript_name=ENST00000529276.1 | |transcript_name=ENST00000529276.1 | ||
|tss_classification= | |tss_classification=yes | ||
|tss_id=hg_233013.1 | |tss_id=hg_233013.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=E9PJE7 | |uniprot_id=E9PJE7 | ||
}} | }} | ||
Revision as of 08:50, 14 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 52 |
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| Nearest PromoterID: | NM_001367468 |
| Entrez ID: | 55626 |
| Nearest Unigene: | Hs.654644 |
| Nearest Refseq: | NM_017749 |
| Nearest Ensembl: | ENSG00000110497 |
| Gene Name: | NADH:ubiquinone oxidoreductase core subunit S3 |
| Gene Alias: | DCAF3|WDR94 |
| Gene Description: | autophagy and beclin 1 regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 32(GTTTTTATGGTA,+,0.00) |
TSS expression
Expression data not found.