TSS: Hg 236423.1: Difference between revisions
From referenceTSS
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|MRP= | |MRP= | ||
|all_trans=ENST00000571722.3:0 NR_003271:0 NR_003924:0 | |all_trans=ENST00000571722.3:0 NR_003271:0 NR_003924:0 | ||
|chr= | |chr=chr17 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss=117 | |distance_to_tss=117 | ||
|end= | |end=19064139 | ||
|end_of_center_position=19064130 | |end_of_center_position=19064130 | ||
|entrez_id=79971 | |entrez_id=79971 | ||
| Line 28: | Line 28: | ||
|num_trans=3 | |num_trans=3 | ||
|species=human | |species=human | ||
|start= | |start=19064119 | ||
|start_of_center_position=19064129 | |start_of_center_position=19064129 | ||
|strand= | |strand=- | ||
|transcript_name=ENST00000571722.3 NR_003271 NR_003924 | |transcript_name=ENST00000571722.3 NR_003271 NR_003924 | ||
|tss_classification= | |tss_classification=no | ||
|tss_id=hg_236423.1 | |tss_id=hg_236423.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 10:09, 14 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 117 |
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| Nearest PromoterID: | NM_024911 |
| Entrez ID: | 79971 |
| Nearest Unigene: | Hs.647659 |
| Nearest Refseq: | NM_024911 |
| Nearest Ensembl: | ENSG00000116729 |
| Gene Name: | small nucleolar RNA, C/D box 3B-2 |
| Gene Alias: | C1orf139|EVI|GPR177|MRP|mig-14 |
| Gene Description: | Wnt ligand secretion mediator |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.