TSS: Hg 121987.1: Difference between revisions
From referenceTSS
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|MMP-8= | |MMP-8= | ||
|PMNL-CL= | |PMNL-CL= | ||
|all_trans= | |all_trans=HGNC:7175 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_002424 | |nearest_refseq=NM_002424 | ||
|nearest_unigene=Hs.161839 | |nearest_unigene=Hs.161839 | ||
|num_trans= | |num_trans=4317 | ||
|species=human | |species=human | ||
|start=102724950 | |start=102724950 | ||
| Line 31: | Line 31: | ||
|strand=- | |strand=- | ||
|tata_box=-33(GGCTTTAAAGAG,-,0.00) | |tata_box=-33(GGCTTTAAAGAG,-,0.00) | ||
|transcript_name=ENST00000236826.8 ENST00000531168.1 ENST00000532799.1 | |transcript_name=ENST00000236826.8 ENST00000531168.1 ENST00000532799.1 AK292659 AK303388 AK303511 AK313374 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_121987.1 | |tss_id=hg_121987.1 | ||
Latest revision as of 01:32, 20 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 0 |
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| Nearest PromoterID: | NM_002424 |
| Entrez ID: | 4317 |
| Nearest Unigene: | Hs.161839 |
| Nearest Refseq: | NM_002424 |
| Nearest Ensembl: | ENSG00000118113 |
| Gene Name: | matrix metallopeptidase 8 |
| Gene Alias: | CLG1|HNC|MMP-8|PMNL-CL |
| Gene Description: | matrix metallopeptidase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GGCTTTAAAGAG,-,0.00) |
TSS expression
Expression data not found.