TSS: Hg 14116.1: Difference between revisions

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Line 2: Line 2:
|AG3=
|AG3=
|NBPF16=
|NBPF16=
|all_trans=ENST00000584793.6:0 NM_001170755:0 NM_001385373:0 NM_001385374:0 NM_001385375:0 NM_001385376:0 NM_001385377:0 NM_001385378:0 NM_173638:0 NM_001385403:0 NM_001385404:0 NM_001385405:0 NM_001385406:0 NM_001385407:0 NM_001385408:0 NM_001385409:0 NM_001385410:0 NM_001385411:0 NM_001385412:0 NM_001385413:0 NM_001385414:0 NM_001385415:0 NM_001385416:0 NM_001385417:0 NM_001385418:0 NM_001385419:0 NM_001385420:0 NM_001385421:0 NM_001385422:0 NM_001385423:0 NM_001385424:0 NM_001385425:0 NM_001385426:0 NM_001385427:0 NM_001385428:0 NM_001385429:0 NM_001385430:0 NM_001385431:0 NM_001385432:0 NM_001385433:0 NM_001385434:0 NM_001385435:0 NM_001385436:0 NM_001385437:0 NM_001385438:0 NM_001385439:0 NM_001385440:0 NM_001385441:0 NM_001385442:0 NM_001385443:0 NM_001385444:0 NM_001385445:0 NM_001385446:0 NM_001385447:0 NM_001385448:0 ENST00000488031.6:7 ENST00000584575.2:10 ENST00000478419.5:63 ENST00000579734.6:96
|all_trans=HGNC:28791
|chr=chr1
|chr=chr1
|cpg_percent=0.105
|cpg_percent=0.105
Line 24: Line 24:
|nearest_refseq=NM_173638
|nearest_refseq=NM_173638
|nearest_unigene=Hs.523572
|nearest_unigene=Hs.523572
|num_trans=59
|num_trans=284565
|species=human
|species=human
|start=144461653
|start=144461653
Line 30: Line 30:
|strand=-
|strand=-
|tata_box=-31(CCTTTAAGGCCC,+,0.00)
|tata_box=-31(CCTTTAAGGCCC,+,0.00)
|transcript_name=ENST00000584793.6 NM_001170755 NM_001385373 NM_001385374 NM_001385375 NM_001385376 NM_001385377 NM_001385378 NM_173638 NM_001385403 NM_001385404 NM_001385405 NM_001385406 NM_001385407 NM_001385408 NM_001385409 NM_001385410 NM_001385411 NM_001385412 NM_001385413 NM_001385414 NM_001385415 NM_001385416 NM_001385417 NM_001385418 NM_001385419 NM_001385420 NM_001385421 NM_001385422 NM_001385423 NM_001385424 NM_001385425 NM_001385426 NM_001385427 NM_001385428 NM_001385429 NM_001385430 NM_001385431 NM_001385432 NM_001385433 NM_001385434 NM_001385435 NM_001385436 NM_001385437 NM_001385438 NM_001385439 NM_001385440 NM_001385441 NM_001385442 NM_001385443 NM_001385444 NM_001385445 NM_001385446 NM_001385447 NM_001385448
|transcript_name=ENST00000584793.6
|tss_classification=yes
|tss_classification=yes
|tss_id=hg_14116.1
|tss_id=hg_14116.1

Latest revision as of 08:28, 20 July 2021

Basic information about the TSS


TSS ID:hg_14116.1
Species:human
Chr:chr1
Start:144461653
End:144461680
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:ENST00000584793.6
Distance:0
GeneID:284565
HGNC/MGI_ID:HGNC:28791
UniProt_ID:Q8N660
Gene_name:NBPF member 15
Gene_symbol:NBPF15
Gene_synonyms:MGC8902
Gene_source:HGNC:28791



TATA-Box annotation


Distance to TSS:-2203
Nearest PromoterID:NM_001170755
Entrez ID:284565
Nearest Unigene:Hs.523572
Nearest Refseq:NM_173638
Nearest Ensembl:ENSG00000266338
Gene Name:NBPF member 15
Gene Alias:AB14|AG3|NBPF16
Gene Description:NBPF member 15
Gene Type:protein-coding
CpG%:0.105
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-31(CCTTTAAGGCCC,+,0.00)



TSS expression

Expression data not found.