TSS: Hg 167865.1: Difference between revisions

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Line 4: Line 4:
|SLNCR=
|SLNCR=
|SLNCR1=
|SLNCR1=
|all_trans=ENST00000648631.1:0 ENST00000649614.1:0 ENST00000453722.6:0 ENST00000648623.2:0 ENST00000649350.1:0 ENST00000648054.1:0 NR_137281:0 NR_137280:0 NR_036488:0 NR_152516:0 NR_152515:0 AK000477:0 KR778895:0 KR778896:0 KR778900:0 AK129763:0 ENST00000650131.2:-17 ENST00000649793.2:-40 ENST00000650419.1:106 ENST00000581801.6:106 ENST00000650476.1:106 ENST00000648088.1:106 ENST00000650227.1:106 ENST00000649250.1:106 ENST00000647953.1:106 ENST00000649343.1:106 ENST00000650423.1:106 ENST00000650570.1:106 ENST00000650161.1:106 ENST00000648954.1:106 ENST00000649936.1:106 ENST00000649407.1:106 ENST00000648428.1:125 ENST00000648248.1:362 ENST00000650482.1:430 LQ718466:484
|all_trans=HGNC:43564 HGNC:44354
|chr=chr17
|chr=chr17
|cpg_percent=0.135
|cpg_percent=0.135
Line 26: Line 26:
|nearest_refseq=NR_036488
|nearest_refseq=NR_036488
|nearest_unigene=Hs.157726
|nearest_unigene=Hs.157726
|num_trans=36
|num_trans=100499467 400619
|species=human
|species=human
|start=72592797
|start=72592797
Line 32: Line 32:
|strand=-
|strand=-
|tata_box=-33(TGGTATATAAGG,-,0.00)
|tata_box=-33(TGGTATATAAGG,-,0.00)
|transcript_name=ENST00000648631.1 ENST00000649614.1 ENST00000453722.6 ENST00000648623.2 ENST00000649350.1 ENST00000648054.1 NR_137281 NR_137280 NR_036488 NR_152516 NR_152515 AK000477 KR778895 KR778896 KR778900 AK129763
|transcript_name=ENST00000648631.1 ENST00000649614.1 ENST00000453722.6 ENST00000648623.2 ENST00000649350.1 ENST00000648054.1 AK000477 KR778895 KR778896 KR778900 AK129763
|tss_classification=no
|tss_classification=no
|tss_id=hg_167865.1
|tss_id=hg_167865.1

Latest revision as of 18:12, 20 July 2021

Basic information about the TSS

TSS ID:hg_167865.1
Species:human
Chr:chr17
Start:72592797
End:72592812
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:ENST00000648631.1 ENST00000649614.1 ENST00000453722.6 ENST00000648623.2 ENST00000649350.1 ENST00000648054.1 AK000477 KR778895 KR778896 KR778900 AK129763
Distance:0
GeneID:100499467 400619
HGNC/MGI_ID:HGNC:43564 HGNC:44354
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 511; long intergenic non-protein coding RNA 673
Gene_symbol:LINC00511 LINC00673
Gene_synonyms:ERRLR01 HI-LNC75 SLNCR1 onco-lncRNA-12
Gene_source:HGNC:43564 HGNC:44354



TATA-Box annotation

Distance to TSS:-1
Nearest PromoterID:NR_152515
Entrez ID:100499467
Nearest Unigene:Hs.157726
Nearest Refseq:NR_036488
Nearest Ensembl:ENSG00000227036
Gene Name:long intergenic non-protein coding RNA 511; long intergenic non-protein coding RNA 673
Gene Alias:ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1
Gene Description:long intergenic non-protein coding RNA 673
Gene Type:ncRNA
CpG%:0.135
GC%:0.731343
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-33(TGGTATATAAGG,-,0.00)



TSS expression

Expression data not found.

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