TSS: Hg 240301.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=HGNC:24746 | ||
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001080415 | |nearest_refseq=NM_001080415 | ||
|nearest_unigene=Hs.596572 | |nearest_unigene=Hs.596572 | ||
|num_trans= | |num_trans=375337 | ||
|species=human | |species=human | ||
|start=44242033 | |start=44242033 | ||
|start_of_center_position=44242033 | |start_of_center_position=44242033 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000309765.4 | |transcript_name=ENST00000309765.4 AK093476 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_240301.1 | |tss_id=hg_240301.1 | ||
Latest revision as of 14:01, 21 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 63 |
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| Nearest PromoterID: | NM_001320219 |
| Entrez ID: | 23350 |
| Nearest Unigene: | Hs.596572 |
| Nearest Refseq: | NM_001080415 |
| Nearest Ensembl: | ENSG00000163714 |
| Gene Name: | testis and ovary specific PAZ domain containing 1 |
| Gene Alias: | SR140|fSAPa |
| Gene Description: | U2 snRNP associated SURP domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.