TSS: Hg 54453.1: Difference between revisions
From referenceTSS
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|PRPF46= | |PRPF46= | ||
|TANGO4= | |TANGO4= | ||
|all_trans= | |all_trans=HGNC:9089 | ||
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_002669 | |nearest_refseq=NM_002669 | ||
|nearest_unigene=Hs.249996 | |nearest_unigene=Hs.249996 | ||
|num_trans= | |num_trans=5356 | ||
|species=human | |species=human | ||
|start=154550376 | |start=154550376 | ||
|start_of_center_position=154550408 | |start_of_center_position=154550408 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000499023.7 ENST00000302078.9 ENST00000506192.5 ENST00000512719.5 ENST00000509975.5 ENST00000503751.5 ENST00000515520.1 | |transcript_name=ENST00000499023.7 ENST00000302078.9 ENST00000506192.5 ENST00000512719.5 ENST00000509975.5 ENST00000503751.5 ENST00000515520.1 BC036046 BC020786 AK002108 AK307997 AK304574 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_54453.1 | |tss_id=hg_54453.1 | ||
Latest revision as of 02:15, 22 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -8 |
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| Nearest PromoterID: | NM_002669 |
| Entrez ID: | 5356 |
| Nearest Unigene: | Hs.249996 |
| Nearest Refseq: | NM_002669 |
| Nearest Ensembl: | ENSG00000171566 |
| Gene Name: | pleiotropic regulator 1 |
| Gene Alias: | Cwc1|PRL1|PRP46|PRPF46|TANGO4 |
| Gene Description: | pleiotropic regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.