TSS: Hg 78412.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|all_trans=ENST00000679020.1:0 ENST00000678497.1:0 ENST00000496112.5:0 ENST00000447123.6:0 ENST00000678359.1:0 ENST00000677851.1:0 ENST00000679310.1:0 ENST00000679209.1:0 ENST00000478411.2:0 ENST00000223369.3:0 ENST00000677436.1:0 ENST00000677090.1:0 NM_001363678:0 NM_006555:0 AK299158:0 AK312622:0 AK223488:0 BC007319:0 AF091079:23 U95735:23 DQ890653:81 DQ893833:81 CU675611:82 KJ893103:82 CR456989:83 AB451447:83 CR542008:83 AB451317:83 BT007078:83
|all_trans=HGNC:16959
|chr=chr7
|chr=chr7
|cpg_percent=0.1
|cpg_percent=0.1
Line 22: Line 22:
|nearest_refseq=NM_006555
|nearest_refseq=NM_006555
|nearest_unigene=Hs.520794
|nearest_unigene=Hs.520794
|num_trans=29
|num_trans=10652
|species=human
|species=human
|start=44200921
|start=44200921
|start_of_center_position=44200987
|start_of_center_position=44200987
|strand=+
|strand=+
|transcript_name=ENST00000679020.1 ENST00000678497.1 ENST00000496112.5 ENST00000447123.6 ENST00000678359.1 ENST00000677851.1 ENST00000679310.1 ENST00000679209.1 ENST00000478411.2 ENST00000223369.3 ENST00000677436.1 ENST00000677090.1 NM_001363678 NM_006555 AK299158 AK312622 AK223488 BC007319
|transcript_name=ENST00000679020.1 ENST00000678497.1 ENST00000496112.5 ENST00000447123.6 ENST00000678359.1 ENST00000677851.1 ENST00000679310.1 ENST00000679209.1 ENST00000478411.2 ENST00000223369.3 ENST00000677436.1 ENST00000677090.1 AK299158 AK312622 AK223488 BC007319
|tss_classification=yes
|tss_classification=yes
|tss_id=hg_78412.1
|tss_id=hg_78412.1

Latest revision as of 10:55, 22 July 2021

Basic information about the TSS

TSS ID:hg_78412.1
Species:human
Chr:chr7
Start:44200921
End:44201053
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:ENST00000679020.1 ENST00000678497.1 ENST00000496112.5 ENST00000447123.6 ENST00000678359.1 ENST00000677851.1 ENST00000679310.1 ENST00000679209.1 ENST00000478411.2 ENST00000223369.3 ENST00000677436.1 ENST00000677090.1 AK299158 AK312622 AK223488 BC007319
Distance:0
GeneID:10652
HGNC/MGI_ID:HGNC:16959
UniProt_ID:A4D2J0 O15498
Gene_name:YKT6 v-SNARE homolog
Gene_symbol:YKT6
Gene_synonyms:
Gene_source:HGNC:16959



TATA-Box annotation

Distance to TSS:9
Nearest PromoterID:NM_001363678
Entrez ID:10652
Nearest Unigene:Hs.520794
Nearest Refseq:NM_006555
Nearest Ensembl:ENSG00000106636
Gene Name:YKT6 v-SNARE homolog
Gene Alias:-
Gene Description:YKT6 v-SNARE homolog
Gene Type:protein-coding
CpG%:0.1
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.

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