TSS: Mm 17761.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:2447809 | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_025619 | |nearest_refseq=NM_025619 | ||
|nearest_unigene=Mm.441499 | |nearest_unigene=Mm.441499 | ||
|num_trans= | |num_trans=227736 | ||
|species=mouse | |species=mouse | ||
|start=32784424 | |start=32784424 | ||
Latest revision as of 13:27, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -30 |
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| Nearest PromoterID: | NM_025619 |
| Entrez ID: | 227736 |
| Nearest Unigene: | Mm.441499 |
| Nearest Refseq: | NM_025619 |
| Nearest Ensembl: | ENSMUSG00000038987 |
| Gene Name: | cilia and flagella associated protein 157 |
| Gene Alias: | 1700019L03Rik |
| Gene Description: | cilia and flagella associated protein 157 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -54(GCCCTTTAAAAC,-,0.00),-53(CCCTTTAAAACC,+,0.00),-52(CCTTTAAAACCC,+,0.00),8(GCTTCTTAAAGG,-,0.00),9(CTTCTTAAAGGG,+,0.00),21(GACTTTAAAAAG,-,0.00),23(CTTTAAAAAGTG,+,0.00) |
TSS expression
Expression data not found.