TSS: Mm 77031.1: Difference between revisions

From referenceTSS
Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{TSSDetail
{{TSSDetail
|all_trans=AK015021:-7 LF197258:-16 MA432835:-16 LF303050:74 MA538627:74
|all_trans=MGI:1918204
|chr=chr8
|chr=chr8
|cpg_percent=0.045
|cpg_percent=0.045
Line 22: Line 22:
|nearest_refseq=NR_151498
|nearest_refseq=NR_151498
|nearest_unigene=Mm.203332
|nearest_unigene=Mm.203332
|num_trans=5
|num_trans=105243282
|species=mouse
|species=mouse
|start=109251698
|start=109251698

Latest revision as of 11:16, 28 July 2021

Basic information about the TSS


TSS ID:mm_77031.1
Species:mouse
Chr:chr8
Start:109251698
End:109251713
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:AK015021
Distance:-7
GeneID:105243282
HGNC/MGI_ID:MGI:1918204
UniProt_ID:Q9D5Q7
Gene_name:RIKEN cDNA 4922502B01 gene
Gene_symbol:4922502B01Rik
Gene_synonyms:
Gene_source:MGI:1918204



TATA-Box annotation


Distance to TSS:-1961
Nearest PromoterID:NR_151498
Entrez ID:105243282
Nearest Unigene:Mm.203332
Nearest Refseq:NR_151498
Nearest Ensembl:
Gene Name:RIKEN cDNA 4922502B01 gene
Gene Alias:2900056M07Rik
Gene Description:RIKEN cDNA 4922502B01 gene
Gene Type:ncRNA
CpG%:0.045
GC%:0.527363
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):73(GCTTTTAAAATC,+,0.00)



TSS expression

Expression data not found.