TSS: Mm 86215.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|Cmya1=
|Cmya1=
|all_trans=AF051945:0 ENSMUST00000111635.2:-24 NM_011724:-24 BC117959:56 BC117960:56
|all_trans=MGI:1333878
|chr=chr9
|chr=chr9
|cpg_percent=0.035
|cpg_percent=0.035
Line 23: Line 23:
|nearest_refseq=NM_011724
|nearest_refseq=NM_011724
|nearest_unigene=Mm.10117
|nearest_unigene=Mm.10117
|num_trans=5
|num_trans=22437
|species=mouse
|species=mouse
|start=120023558
|start=120023558

Latest revision as of 14:37, 28 July 2021

Basic information about the TSS


TSS ID:mm_86215.1
Species:mouse
Chr:chr9
Start:120023558
End:120023574
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:AF051945
Distance:0
GeneID:22437
HGNC/MGI_ID:MGI:1333878
UniProt_ID:
Gene_name:xin actin-binding repeat containing 1
Gene_symbol:Xirp1
Gene_synonyms:Cmya1 Xin mXin_alpha
Gene_source:MGI:1333878



TATA-Box annotation


Distance to TSS:32
Nearest PromoterID:NM_011724
Entrez ID:22437
Nearest Unigene:Mm.10117
Nearest Refseq:NM_011724
Nearest Ensembl:ENSMUSG00000079243
Gene Name:xin actin-binding repeat containing 1
Gene Alias:AI415219|Cmya1
Gene Description:xin actin-binding repeat containing 1
Gene Type:protein-coding
CpG%:0.035
GC%:0.59204
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.