Template: Test area: Difference between revisions

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<div style="width:42%; float:left;">
<div style="width:42%; float:left;">
<table class="inner" >
<table class="inner" >
<tr><th scope="row" class="item_label">TSS ID:</th><td>[[tss_id::{{{tss_id}}}]]</td></tr>
<tr><th scope="row" class="item_label">TSS ID:</th><td>[[Tss id::{{{tss_id}}}]]</td></tr>
<tr><th scope="row" class="item_label">Species:</th><td>{{{species}}}</td></tr>
<tr><th scope="row" class="item_label">Species:</th><td>{{{species}}}</td></tr>
<tr><th scope="row" class="item_label">Chr:</th><td>{{{chr}}}</td></tr>
<tr><th scope="row" class="item_label">Chr:</th><td>{{{chr}}}</td></tr>

Latest revision as of 13:34, 7 March 2018

Basic information about the TSS


TSS ID:{{{tss_id}}}
Species:{{{species}}}
Chr:{{{chr}}}
TSS Classification:{{{tss_classification}}}
Start:{{{start}}}
End:{{{end}}}
Strand:{{{strand}}}
TSS Score:{{{strand}}}



Gene and protein annotation


Transcript_name:{{{transcript_name}}}
Distance:{{{distance}}}
GeneID:{{{gene_id}}}
HGNC/MGI_ID:{{{hgnc_mgi_id}}}
UniProt_ID:{{{uniprot_id}}}
Gene_name:{{{gene_name}}}
Gene_symbol:{{{gene_symbol}}}
Gene_synonyms:{{{gene_synonyms}}}
Gene_source:{{{gene_source}}}



Transcript annotation


Transcript_name:{{{transcript_name}}}
Distance:{{{distance}}}
Num_trans:{{{num_trans}}}
All_trans::{{{all_trans}}}



TATA-Box annotation


Distance to TSS:{{{distance_to_tss}}}
Nearest PromoterID:{{{nearest_promoter_id}}}
Entrez ID:{{{entrez_id}}}
Nearest Unigene:{{{nearest_unigene}}}
Nearest Refseq:{{{nearest_refseq}}}
Nearest Ensembl:{{{nearest_ensembl}}}
Gene Name:{{{gene_name}}}
Gene Alias:{{{gene_alias}}}
Gene Description:{{{gene_description}}}
Gene Type:{{{gene_type}}}
CpG%:{{{cpg_percent}}}
GC%:{{{gc_percent}}}
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):{{{tata_box}}}

{{{param1}}} × 10{{{param2}}}