TSS: Rfhg 102241.1: Difference between revisions
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|annotation=promoter-TSS ( | |annotation=promoter-TSS (NR_034012) | ||
|ccre_category=N | |ccre_category=N | ||
|ccre_description=N | |ccre_description=N | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.041667 | |cpg_percent=0.041667 | ||
|detailed_annotation= | |detailed_annotation=promoter-TSS (NR_034012) | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=93 | ||
|end=151409278 | |end=151409278 | ||
|entrez_id= | |entrez_id=100131176 | ||
|focus_ratio=NA | |focus_ratio=NA | ||
|gc_percent=0.673469 | |gc_percent=0.673469 | ||
|gene_alias= | |gene_alias=- | ||
|gene_description= | |gene_description=WDR86 antisense RNA 1 | ||
|gene_id=100131176 | |gene_id=100131176 | ||
|gene_name=WDR86 | |gene_name=WDR86-AS1 | ||
|gene_source=HGNC:41186 | |gene_source=HGNC:41186 | ||
|gene_symbol=WDR86-AS1 | |gene_symbol=WDR86-AS1 | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type= | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:41186 | |hgnc_mgi_id=HGNC:41186 | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000243836 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_109857 | ||
|nearest_refseq= | |nearest_refseq=NR_034012 | ||
|nearest_unigene= | |nearest_unigene=Hs.659231 | ||
|peak_score=1 | |peak_score=1 | ||
|reftss_version=4 | |reftss_version=4 | ||
|species=human | |species=human | ||
|start= | |start=151409230 | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
Revision as of 16:42, 22 June 2023
Basic information about the TSS
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| Source datasets | ||||||||||||||
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| Protocol | ||||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 93 |
|---|---|
| Nearest PromoterID: | NR_109857 |
| Entrez ID: | 100131176 |
| Nearest Unigene: | Hs.659231 |
| Nearest Refseq: | NR_034012 |
| Nearest Ensembl: | ENSG00000243836 |
| Gene Name: | WDR86-AS1 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.041667 |
| GC%: | 0.673469 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.