TSS: Rfhg 102738.1: Difference between revisions
From referenceTSS
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|annotation=intron ( | |annotation=intron (NM_130842, intron 1 of 21) | ||
|ccre_category=dELS | |ccre_category=dELS | ||
|ccre_description=dELS (EH38D4053098,EH38E2605094) | |ccre_description=dELS (EH38D4053098,EH38E2605094) | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.000000 | |cpg_percent=0.000000 | ||
|detailed_annotation= | |detailed_annotation=intron (NM_130842, intron 1 of 21) | ||
|distance= | |distance= | ||
|distance_to_tss=100779 | |distance_to_tss=100779 | ||
|end=158432053 | |end=158432053 | ||
|entrez_id= | |entrez_id=693180 | ||
|focus_ratio=NA | |focus_ratio=NA | ||
|gc_percent=0.500000 | |gc_percent=0.500000 | ||
|gene_alias= | |gene_alias=MIRN595{{!}}hsa-mir-595 | ||
|gene_description= | |gene_description=microRNA 595 | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name=MIR595 | ||
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type= | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000207637 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_030325 | ||
|nearest_refseq= | |nearest_refseq=NR_030325 | ||
|nearest_unigene= | |nearest_unigene= | ||
|peak_score=1 | |peak_score=1 | ||
|reftss_version=4 | |reftss_version=4 | ||
|species=human | |species=human | ||
|start= | |start=158432016 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box= |
Revision as of 16:50, 22 June 2023
Basic information about the TSS
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Source datasets | ||||||||||||||||
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Protocol | ||||||||||||||||
TSS cluster detected* | 5 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | dELS (EH38D4053098,EH38E2605094) |
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Category: | dELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 100779 |
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Nearest PromoterID: | NR_030325 |
Entrez ID: | 693180 |
Nearest Unigene: | |
Nearest Refseq: | NR_030325 |
Nearest Ensembl: | ENSG00000207637 |
Gene Name: | MIR595 |
Gene Alias: | MIRN595|hsa-mir-595 |
Gene Type: | ncRNA |
CpG%: | 0.000000 |
GC%: | 0.500000 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |