TSS: Rfhg 117768.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetailV4 |annotation=intron (ENST00000472574.1, intron 1 of 3) |ccre_category=pELS |ccre_description=pELS,CTCF-bound (EH38D4222766,EH38E2715029) |chr=chr9 |cpg_percent=0....") |
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|annotation=intron ( | |annotation=intron (NM_001347997, intron 1 of 12) | ||
|ccre_category=pELS | |ccre_category=pELS | ||
|ccre_description=pELS,CTCF-bound (EH38D4222766,EH38E2715029) | |ccre_description=pELS,CTCF-bound (EH38D4222766,EH38E2715029) | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.000000 | |cpg_percent=0.000000 | ||
|detailed_annotation= | |detailed_annotation=intron (NM_001347997, intron 1 of 12) | ||
|distance= | |distance= | ||
|distance_to_tss=1477 | |distance_to_tss=1477 | ||
|end=106864645 | |end=106864645 | ||
|entrez_id= | |entrez_id=58499 | ||
|focus_ratio=NA | |focus_ratio=NA | ||
|gc_percent=0.800000 | |gc_percent=0.800000 | ||
|gene_alias= | |gene_alias=ZFPIP{{!}}Zfp462 | ||
|gene_description= | |gene_description=zinc finger protein 462 | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name=ZNF462 | ||
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type= | |gene_type=protein-coding | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000148143 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001347997 | ||
|nearest_refseq= | |nearest_refseq=NM_021224 | ||
|nearest_unigene= | |nearest_unigene=Hs.370379 | ||
|peak_score=1 | |peak_score=1 | ||
|reftss_version=4 | |reftss_version=4 | ||
|species=human | |species=human | ||
|start= | |start=106864641 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box= |
Revision as of 21:09, 22 June 2023
Basic information about the TSS
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Source datasets | ||||||||||||||
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Protocol | ||||||||||||||
TSS cluster detected* | 1 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | pELS,CTCF-bound (EH38D4222766,EH38E2715029) |
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Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 1477 |
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Nearest PromoterID: | NM_001347997 |
Entrez ID: | 58499 |
Nearest Unigene: | Hs.370379 |
Nearest Refseq: | NM_021224 |
Nearest Ensembl: | ENSG00000148143 |
Gene Name: | ZNF462 |
Gene Alias: | ZFPIP|Zfp462 |
Gene Type: | protein-coding |
CpG%: | 0.000000 |
GC%: | 0.800000 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |