TSS: Rfhg 137339.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetailV4 |annotation=intron (ENST00000532756.1, intron 4 of 4) |ccre_category=dELS |ccre_description=dELS,CTCF-bound (EH38D2454387,EH38E1540876) |chr=chr11 |cpg_percent=0...") |
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|annotation= | |annotation=Intergenic | ||
|ccre_category=dELS | |ccre_category=dELS | ||
|ccre_description=dELS,CTCF-bound (EH38D2454387,EH38E1540876) | |ccre_description=dELS,CTCF-bound (EH38D2454387,EH38E1540876) | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.000000 | |cpg_percent=0.000000 | ||
|detailed_annotation= | |detailed_annotation=Intergenic | ||
|distance=67 | |distance=67 | ||
|distance_to_tss=- | |distance_to_tss=-14743 | ||
|end=60363747 | |end=60363747 | ||
|entrez_id= | |entrez_id=58475 | ||
|focus_ratio=NA | |focus_ratio=NA | ||
|gc_percent=0.363636 | |gc_percent=0.363636 | ||
|gene_alias= | |gene_alias=4SPAN2{{!}}CD20L4{{!}}CFFM4{{!}}MS4A8 | ||
|gene_description= | |gene_description=membrane spanning 4-domains A7 | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name=MS4A7 | ||
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type= | |gene_type=protein-coding | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000166927 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_206938 | ||
|nearest_refseq= | |nearest_refseq=NM_021201 | ||
|nearest_unigene= | |nearest_unigene=Hs.530735 | ||
|peak_score=1 | |peak_score=1 | ||
|reftss_version=4 | |reftss_version=4 | ||
|species=human | |species=human | ||
|start= | |start=60363737 | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
Revision as of 02:49, 23 June 2023
Basic information about the TSS
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| Source datasets | ||||||||||||||
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| Protocol | ||||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | dELS,CTCF-bound (EH38D2454387,EH38E1540876) |
|---|---|
| Category: | dELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -14743 |
|---|---|
| Nearest PromoterID: | NM_206938 |
| Entrez ID: | 58475 |
| Nearest Unigene: | Hs.530735 |
| Nearest Refseq: | NM_021201 |
| Nearest Ensembl: | ENSG00000166927 |
| Gene Name: | MS4A7 |
| Gene Alias: | 4SPAN2|CD20L4|CFFM4|MS4A8 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.363636 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |