TSS: Rfhg 140276.1: Difference between revisions

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|detailed_annotation=Intergenic
|detailed_annotation=Intergenic
|distance=
|distance=
|distance_to_tss=-10730
|distance_to_tss=-10758
|end=68282744
|end=68282744
|entrez_id=ENSG00000171067
|entrez_id=53838
|focus_ratio=NA
|focus_ratio=NA
|gc_percent=0.576923
|gc_percent=0.576923
|gene_alias=
|gene_alias=DM4E3
|gene_description=
|gene_description=chromosome 11 open reading frame 24
|gene_id=
|gene_id=
|gene_name=
|gene_name=C11orf24
|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=
|gene_synonyms=
|gene_synonyms=
|gene_type=protein_coding
|gene_type=protein-coding
|hgnc_mgi_id=
|hgnc_mgi_id=
|nearest_ensembl=
|nearest_ensembl=ENSG00000171067
|nearest_promoter_id=ENST00000530166.5
|nearest_promoter_id=NM_022338
|nearest_refseq=
|nearest_refseq=NM_022338
|nearest_unigene=ENST00000530166
|nearest_unigene=Hs.303025
|peak_score=1
|peak_score=1
|reftss_version=4
|reftss_version=4
|species=human
|species=human
|start=68282718
|start=68282719
|strand=+
|strand=+
|tata_box=
|tata_box=

Revision as of 03:42, 23 June 2023

Basic information about the TSS


TSS ID:rfhg_140276.1
Species:human
Chr:chr11
Start:68282719
End:68282744
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D2462978,EH38E1547790)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:C11orf24
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-10758
    Nearest PromoterID:NM_022338
    Entrez ID:53838
    Nearest Unigene:Hs.303025
    Nearest Refseq:NM_022338
    Nearest Ensembl:ENSG00000171067
    Gene Name:C11orf24
    Gene Alias:DM4E3
    Gene Type:protein-coding
    CpG%:0.040000
    GC%:0.576923
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):