TSS: Rfhg 216173.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetailV4 |annotation=promoter-TSS (ENST00000270442.5) |ccre_category=PLS |ccre_description=PLS (EH38D3074853,EH38E1964374) |chr=chr19 |cpg_percent=0.000000 |detailed_anno...") |
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|annotation=promoter-TSS ( | |annotation=promoter-TSS (NM_006737).10 | ||
|ccre_category=PLS | |ccre_category=PLS | ||
|ccre_description=PLS (EH38D3074853,EH38E1964374) | |ccre_description=PLS (EH38D3074853,EH38E1964374) | ||
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.000000 | |cpg_percent=0.000000 | ||
|detailed_annotation= | |detailed_annotation=promoter-TSS (NM_006737).10 | ||
|distance=25 | |distance=25 | ||
|distance_to_tss=-25 | |distance_to_tss=-25 | ||
|end=54850418 | |end=54850418 | ||
|entrez_id= | |entrez_id=3812 | ||
|focus_ratio=NA | |focus_ratio=NA | ||
|gc_percent=0.000000 | |gc_percent=0.000000 | ||
|gene_alias= | |gene_alias=3DL2{{!}}CD158K{{!}}KIR-3DL2{{!}}NKAT-4{{!}}NKAT4{{!}}NKAT4B{{!}}p140 | ||
|gene_description= | |gene_description=killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 2 | ||
|gene_id=3812 | |gene_id=3812 | ||
|gene_name= | |gene_name=KIR3DL2 | ||
|gene_source=HGNC:6339 | |gene_source=HGNC:6339 | ||
|gene_symbol=KIR3DL2 | |gene_symbol=KIR3DL2 | ||
|gene_synonyms=CD158K cl-5 nkat4 nkat4a nkat4b | |gene_synonyms=CD158K cl-5 nkat4 nkat4a nkat4b | ||
|gene_type= | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:6339 | |hgnc_mgi_id=HGNC:6339 | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000240403 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001242867 | ||
|nearest_refseq= | |nearest_refseq=NM_006737 | ||
|nearest_unigene= | |nearest_unigene=Hs.645228 | ||
|peak_score=1 | |peak_score=1 | ||
|reftss_version=4 | |reftss_version=4 | ||
|species=human | |species=human | ||
|start= | |start=54850418 | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= |
Revision as of 01:46, 24 June 2023
Basic information about the TSS
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Source datasets | ||||||||||||||
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Protocol | ||||||||||||||
TSS cluster detected* | 1 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | PLS (EH38D3074853,EH38E1964374) |
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Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -25 |
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Nearest PromoterID: | NM_001242867 |
Entrez ID: | 3812 |
Nearest Unigene: | Hs.645228 |
Nearest Refseq: | NM_006737 |
Nearest Ensembl: | ENSG00000240403 |
Gene Name: | KIR3DL2 |
Gene Alias: | 3DL2|CD158K|KIR-3DL2|NKAT-4|NKAT4|NKAT4B|p140 |
Gene Type: | protein-coding |
CpG%: | 0.000000 |
GC%: | 0.000000 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.