TSS: Hg 100021.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-133097 |entrez_id=4781 |gc_percent=0.467662 |gene_alias=CTF|HMGIC/NFIB|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 |gene_descriptio...") |
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{{TSSDetail | {{TSSDetail | ||
|HMGIC/NFIB= | |||
|NF-I/B= | |||
|NF1-B= | |||
|NFI-B= | |||
|NFI-RED= | |||
|NFIB2= | |||
|NFIB3= | |||
|all_trans=ENST00000421119.1:29 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=29 | |||
|distance_to_tss=-133097 | |distance_to_tss=-133097 | ||
|end=14532089 | |||
|entrez_id=4781 | |entrez_id=4781 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 12: | Line 23: | ||
|nearest_refseq=NM_005596 | |nearest_refseq=NM_005596 | ||
|nearest_unigene=Hs.644095 | |nearest_unigene=Hs.644095 | ||
|num_trans=1 | |||
|species=human | |||
|start=14532070 | |||
|strand=- | |||
|transcript_name=ENST00000421119.1 | |||
|tss_classification=yes | |||
|tss_id=hg_100021.1 | |tss_id=hg_100021.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 16:59, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -133097 |
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| Nearest PromoterID: | NM_001190738 |
| Entrez ID: | 4781 |
| Nearest Unigene: | Hs.644095 |
| Nearest Refseq: | NM_005596 |
| Nearest Ensembl: | ENSG00000147862 |
| Gene Name: | NFIB |
| Gene Alias: | CTF |
| Gene Description: | nuclear factor I B |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |