TSS: Hg 100061.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-11437 |entrez_id=158326 |gc_percent=0.467662 |gene_alias=BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 |gene_description=F...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|C9orf143= | |||
|C9orf145= | |||
|C9orf154= | |||
|MOTA= | |||
|TILRR= | |||
|TRIGNO2= | |||
|all_trans=ENST00000397561.3:97 | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=97 | |||
|distance_to_tss=-11437 | |distance_to_tss=-11437 | ||
|end=14922434 | |||
|entrez_id=158326 | |entrez_id=158326 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
|gene_alias=BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 | |gene_alias=BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 | ||
|gene_description=FRAS1 related extracellular matrix 1 | |gene_description=FRAS1 related extracellular matrix 1 | ||
|gene_name= | |gene_id= | ||
|gene_name=lactate dehydrogenase A pseudogene 4 | |||
|gene_source=HGNC:6539 | |||
|gene_symbol=LDHAP4 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:6539 | |||
|nearest_ensembl=ENSG00000164946 | |nearest_ensembl=ENSG00000164946 | ||
|nearest_promoter_id=NM_144966 | |nearest_promoter_id=NM_144966 | ||
|nearest_refseq=NM_144966 | |nearest_refseq=NM_144966 | ||
|nearest_unigene=Hs.50850 | |nearest_unigene=Hs.50850 | ||
|num_trans=1 | |||
|species=human | |||
|start=14922430 | |||
|strand=- | |||
|transcript_name=ENST00000397561.3 | |||
|tss_classification=no | |||
|tss_id=hg_100061.1 | |tss_id=hg_100061.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 17:00, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -11437 |
|---|---|
| Nearest PromoterID: | NM_144966 |
| Entrez ID: | 158326 |
| Nearest Unigene: | Hs.50850 |
| Nearest Refseq: | NM_144966 |
| Nearest Ensembl: | ENSG00000164946 |
| Gene Name: | lactate dehydrogenase A pseudogene 4 |
| Gene Alias: | BNAR |
| Gene Description: | FRAS1 related extracellular matrix 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.