TSS: Hg 100070.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=7604 |entrez_id=158219 |gc_percent=0.482587 |gene_alias=C9orf52 |gene_description=tetratricopeptide repeat domain 39B |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |||
|distance_to_tss=7604 | |distance_to_tss=7604 | ||
|end=15299766 | |||
|entrez_id=158219 | |entrez_id=158219 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_152574 | |nearest_refseq=NM_152574 | ||
|nearest_unigene=Hs.563630 | |nearest_unigene=Hs.563630 | ||
|num_trans=0 | |||
|species=human | |||
|start=15299746 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100070.1 | |tss_id=hg_100070.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:00, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 7604 |
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| Nearest PromoterID: | NM_001168341 |
| Entrez ID: | 158219 |
| Nearest Unigene: | Hs.563630 |
| Nearest Refseq: | NM_152574 |
| Nearest Ensembl: | ENSG00000155158 |
| Gene Name: | TTC39B |
| Gene Alias: | C9orf52 |
| Gene Description: | tetratricopeptide repeat domain 39B |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |