TSS: Hg 100080.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=25379 |entrez_id=11168 |gc_percent=0.477612 |gene_alias=DFS70|LEDGF|PAIP|PSIP2|p52|p75 |gene_description=PC4 and SFRS1 interacti...") |
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{{TSSDetail | {{TSSDetail | ||
|LEDGF= | |||
|PAIP= | |||
|PSIP2= | |||
|chr=chr9 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance= | |||
|distance_to_tss=25379 | |distance_to_tss=25379 | ||
|end=15484912 | |||
|entrez_id=11168 | |entrez_id=11168 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_021144 | |nearest_refseq=NM_021144 | ||
|nearest_unigene=Hs.658434 | |nearest_unigene=Hs.658434 | ||
|num_trans=0 | |||
|p52= | |||
|p75= | |||
|species=human | |||
|start=15484908 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100080.1 | |tss_id=hg_100080.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:01, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 25379 |
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| Nearest PromoterID: | NM_021144 |
| Entrez ID: | 11168 |
| Nearest Unigene: | Hs.658434 |
| Nearest Refseq: | NM_021144 |
| Nearest Ensembl: | ENSG00000164985 |
| Gene Name: | PSIP1 |
| Gene Alias: | DFS70 |
| Gene Description: | PC4 and SFRS1 interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |