TSS: Hg 100166.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=55677 |entrez_id=340485 |gc_percent=0.507463 |gene_alias=ALKCDase2|ASAH3L |gene_description=alkaline ceramidase 2 |gene_name=ACE...") |
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{{TSSDetail | {{TSSDetail | ||
|ASAH3L= | |||
|all_trans=ENST00000438342.1:78 | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=78 | |||
|distance_to_tss=55677 | |distance_to_tss=55677 | ||
|end=19464606 | |||
|entrez_id=340485 | |entrez_id=340485 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
|gene_alias=ALKCDase2|ASAH3L | |gene_alias=ALKCDase2|ASAH3L | ||
|gene_description=alkaline ceramidase 2 | |gene_description=alkaline ceramidase 2 | ||
|gene_name= | |gene_id= | ||
|gene_name=microtubule associated protein 1 light chain 3 beta pseudogene 1 | |||
|gene_source=HGNC:49783 | |||
|gene_symbol=MAP1LC3BP1 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:49783 | |||
|nearest_ensembl=ENSG00000177076 | |nearest_ensembl=ENSG00000177076 | ||
|nearest_promoter_id=NM_001010887 | |nearest_promoter_id=NM_001010887 | ||
|nearest_refseq=NM_001010887 | |nearest_refseq=NM_001010887 | ||
|nearest_unigene=Hs.41379 | |nearest_unigene=Hs.41379 | ||
|num_trans=1 | |||
|species=human | |||
|start=19464601 | |||
|strand=- | |||
|transcript_name=ENST00000438342.1 | |||
|tss_classification=no | |||
|tss_id=hg_100166.1 | |tss_id=hg_100166.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 17:02, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 55677 |
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| Nearest PromoterID: | NM_001010887 |
| Entrez ID: | 340485 |
| Nearest Unigene: | Hs.41379 |
| Nearest Refseq: | NM_001010887 |
| Nearest Ensembl: | ENSG00000177076 |
| Gene Name: | microtubule associated protein 1 light chain 3 beta pseudogene 1 |
| Gene Alias: | ALKCDase2 |
| Gene Description: | alkaline ceramidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.