TSS: Hg 100206.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=21 |entrez_id=3456 |gc_percent=0.442786 |gene_alias=IFB|IFF|IFN-beta|IFNB |gene_description=interferon beta 1 |gene_name=IFNB1...") |
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{{TSSDetail | {{TSSDetail | ||
|IFF= | |||
|IFN-beta= | |||
|IFNB= | |||
|all_trans=M28622:0 M25460:1 V00546:8 ENST00000380232.3:-19 NM_002176:-19 uc003zok.4:-19 M17373:-19 KJ891438:63 AB587428:71 V00547:72 BC096151:72 BC096153:72 BC069314:72 BC096152:72 BC096150:72 AB451323:72 AB451452:72 AB451491:135 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |||
|distance_to_tss=21 | |distance_to_tss=21 | ||
|end=21077944 | |||
|entrez_id=3456 | |entrez_id=3456 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
|gene_alias=IFB|IFF|IFN-beta|IFNB | |gene_alias=IFB|IFF|IFN-beta|IFNB | ||
|gene_description=interferon beta 1 | |gene_description=interferon beta 1 | ||
|gene_name=IFNB1 | |gene_id=3456 | ||
|gene_name=interferon beta 1 | |||
|gene_source=HGNC:5434 | |||
|gene_symbol=IFNB1 | |||
|gene_synonyms=IFB IFF | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:5434 | |||
|nearest_ensembl=ENSG00000171855 | |nearest_ensembl=ENSG00000171855 | ||
|nearest_promoter_id=NM_002176 | |nearest_promoter_id=NM_002176 | ||
|nearest_refseq=NM_002176 | |nearest_refseq=NM_002176 | ||
|nearest_unigene=Hs.93177 | |nearest_unigene=Hs.93177 | ||
|num_trans=18 | |||
|species=human | |||
|start=21077940 | |||
|strand=- | |||
|transcript_name=M28622 | |||
|tss_classification=no | |||
|tss_id=hg_100206.1 | |tss_id=hg_100206.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 17:03, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 21 |
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| Nearest PromoterID: | NM_002176 |
| Entrez ID: | 3456 |
| Nearest Unigene: | Hs.93177 |
| Nearest Refseq: | NM_002176 |
| Nearest Ensembl: | ENSG00000171855 |
| Gene Name: | interferon beta 1 |
| Gene Alias: | IFB |
| Gene Description: | interferon beta 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.