TSS: Hg 100209.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-26 |entrez_id=3448 |gc_percent=0.437811 |gene_alias=IFN-alphaH|LEIF2H |gene_description=interferon alpha 14 |gene_name=IFNA14 |...") |
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{{TSSDetail | {{TSSDetail | ||
|LEIF2H= | |||
|all_trans=ENST00000380222.3:12 uc010mis.4:12 V00542:12 NM_002172:24 BC074956:24 BC104159:26 BC104160:26 KJ891434:68 | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=12 | |||
|distance_to_tss=-26 | |distance_to_tss=-26 | ||
|end=21240007 | |||
|entrez_id=3448 | |entrez_id=3448 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
|gene_alias=IFN-alphaH|LEIF2H | |gene_alias=IFN-alphaH|LEIF2H | ||
|gene_description=interferon alpha 14 | |gene_description=interferon alpha 14 | ||
|gene_name=IFNA14 | |gene_id=3448 | ||
|gene_name=interferon alpha 14 | |||
|gene_source=HGNC:5420 | |||
|gene_symbol=IFNA14 | |||
|gene_synonyms=IFN-alphaH LEIF2H | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:5420 | |||
|nearest_ensembl=ENSG00000228083 | |nearest_ensembl=ENSG00000228083 | ||
|nearest_promoter_id=NM_002172 | |nearest_promoter_id=NM_002172 | ||
|nearest_refseq=NM_002172 | |nearest_refseq=NM_002172 | ||
|nearest_unigene=Hs.93907 | |nearest_unigene=Hs.93907 | ||
|num_trans=8 | |||
|species=human | |||
|start=21240002 | |||
|strand=- | |||
|transcript_name=ENST00000380222.3 uc010mis.4 V00542 | |||
|tss_classification=no | |||
|tss_id=hg_100209.1 | |tss_id=hg_100209.1 | ||
|tss_score=1 | |||
|uniprot_id=P01570 | |||
}} | }} | ||
Revision as of 17:03, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -26 |
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| Nearest PromoterID: | NM_002172 |
| Entrez ID: | 3448 |
| Nearest Unigene: | Hs.93907 |
| Nearest Refseq: | NM_002172 |
| Nearest Ensembl: | ENSG00000228083 |
| Gene Name: | interferon alpha 14 |
| Gene Alias: | IFN-alphaH |
| Gene Description: | interferon alpha 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.