TSS: Hg 100291.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=5164 |entrez_id=1993 |gc_percent=0.263682 |gene_alias=HEL-N1|HELN1|HUB |gene_description=ELAV like RNA binding protein 2 |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
|HELN1= | |||
|HUB= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |||
|distance_to_tss=5164 | |distance_to_tss=5164 | ||
|end=23816317 | |||
|entrez_id=1993 | |entrez_id=1993 | ||
|gc_percent=0.263682 | |gc_percent=0.263682 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_004432 | |nearest_refseq=NM_004432 | ||
|nearest_unigene=Hs.166109 | |nearest_unigene=Hs.166109 | ||
|num_trans=0 | |||
|species=human | |||
|start=23816315 | |||
|strand=- | |||
|tata_box="39(CTCTTTATGGGA,+,0.00)" | |tata_box="39(CTCTTTATGGGA,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100291.1 | |tss_id=hg_100291.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:05, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 5164 |
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| Nearest PromoterID: | NM_001171197 |
| Entrez ID: | 1993 |
| Nearest Unigene: | Hs.166109 |
| Nearest Refseq: | NM_004432 |
| Nearest Ensembl: | ENSG00000107105 |
| Gene Name: | ELAVL2 |
| Gene Alias: | HEL-N1 |
| Gene Description: | ELAV like RNA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.263682 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "39(CTCTTTATGGGA,+,0.00)" |