TSS: Hg 100313.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=248203 |entrez_id=79886 |gc_percent=0.542289 |gene_alias=C9orf82|CAAP |gene_description=caspase activity and apoptosis inhibitor...") |
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{{TSSDetail | {{TSSDetail | ||
|CAAP= | |||
|all_trans=ENST00000625030.1:27 uc022bew.2:27 BC041871:27 | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=27 | |||
|distance_to_tss=248203 | |distance_to_tss=248203 | ||
|end=26644628 | |||
|entrez_id=79886 | |entrez_id=79886 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_024828 | |nearest_refseq=NM_024828 | ||
|nearest_unigene=Hs.178357 | |nearest_unigene=Hs.178357 | ||
|num_trans=3 | |||
|species=human | |||
|start=26644621 | |||
|strand=- | |||
|transcript_name=ENST00000625030.1 uc022bew.2 BC041871 | |||
|tss_classification=no | |||
|tss_id=hg_100313.1 | |tss_id=hg_100313.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:06, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 248203 |
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| Nearest PromoterID: | NM_001167575 |
| Entrez ID: | 79886 |
| Nearest Unigene: | Hs.178357 |
| Nearest Refseq: | NM_024828 |
| Nearest Ensembl: | ENSG00000120159 |
| Gene Name: | CAAP1 |
| Gene Alias: | C9orf82 |
| Gene Description: | caspase activity and apoptosis inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |