TSS: Hg 100318.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-10607 |entrez_id=80173 |gc_percent=0.462687 |gene_alias=BBS20|CCDC2|CMG-1|CMG1 |gene_description=intraflagellar transport 74 |g...") |
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{{TSSDetail | {{TSSDetail | ||
|CCDC2= | |||
|CMG-1= | |||
|CMG1= | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |||
|distance_to_tss=-10607 | |distance_to_tss=-10607 | ||
|end=26936434 | |||
|entrez_id=80173 | |entrez_id=80173 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_025103 | |nearest_refseq=NM_025103 | ||
|nearest_unigene=Hs.145402 | |nearest_unigene=Hs.145402 | ||
|num_trans=0 | |||
|species=human | |||
|start=26936429 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100318.1 | |tss_id=hg_100318.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:06, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -10607 |
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| Nearest PromoterID: | NM_001099223 |
| Entrez ID: | 80173 |
| Nearest Unigene: | Hs.145402 |
| Nearest Refseq: | NM_025103 |
| Nearest Ensembl: | ENSG00000096872 |
| Gene Name: | IFT74 |
| Gene Alias: | BBS20 |
| Gene Description: | intraflagellar transport 74 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |