TSS: Hg 100369.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.165 |distance_to_tss=714 |entrez_id=158038 |gc_percent=0.800995 |gene_alias=LERN3|LRRN6C |gene_description=leucine rich repeat and Ig domain contain...") |
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{{TSSDetail | {{TSSDetail | ||
|LRRN6C= | |||
|chr=chr9 | |||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
|distance= | |||
|distance_to_tss=714 | |distance_to_tss=714 | ||
|end=29212306 | |||
|entrez_id=158038 | |entrez_id=158038 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_152570 | |nearest_refseq=NM_152570 | ||
|nearest_unigene=Hs.444665 | |nearest_unigene=Hs.444665 | ||
|num_trans=0 | |||
|species=human | |||
|start=29212265 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_100369.1 | |tss_id=hg_100369.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:07, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 714 |
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| Nearest PromoterID: | NM_001258282 |
| Entrez ID: | 158038 |
| Nearest Unigene: | Hs.444665 |
| Nearest Refseq: | NM_152570 |
| Nearest Ensembl: | ENSG00000174482 |
| Gene Name: | LINGO2 |
| Gene Alias: | LERN3 |
| Gene Description: | leucine rich repeat and Ig domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |