TSS: Hg 100386.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=2057 |entrez_id=23586 |gc_percent=0.353234 |gene_alias=RIG-I|RIGI|RLR-1|SGMRT2 |gene_description=DExD/H-box helicase 58 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
|RIGI= | |||
|RLR-1= | |||
|SGMRT2= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=2057 | |distance_to_tss=2057 | ||
|end=32524276 | |||
|entrez_id=23586 | |entrez_id=23586 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_014314 | |nearest_refseq=NM_014314 | ||
|nearest_unigene=Hs.190622 | |nearest_unigene=Hs.190622 | ||
|num_trans=0 | |||
|species=human | |||
|start=32524257 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100386.1 | |tss_id=hg_100386.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:07, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2057 |
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| Nearest PromoterID: | NM_014314 |
| Entrez ID: | 23586 |
| Nearest Unigene: | Hs.190622 |
| Nearest Refseq: | NM_014314 |
| Nearest Ensembl: | ENSG00000107201 |
| Gene Name: | DDX58 |
| Gene Alias: | RIG-I |
| Gene Description: | DExD/H-box helicase 58 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |