TSS: Hg 100396.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=97 |entrez_id=4712 |gc_percent=0.616915 |gene_alias=B17|CI |gene_description=NADH:ubiquinone oxidoreductase subunit B6 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
|CI= | |||
|all_trans=KJ891678:14 CR456920:15 AF035840:-28 BC029247:-29 AK289702:-38 AF067167:-55 BC016708:-56 ENST00000350021.2:-59 uc003zrf.3:-59 BC009801:-59 ENST00000379847.7:-62 uc003zre.3:-62 ENST00000366466.5:-84 NM_002493:-84 NM_001199987:-84 NM_182739:-84 uc022bfg.2:-84 | |||
|chr=chr9 | |||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=14 | |||
|distance_to_tss=97 | |distance_to_tss=97 | ||
|end=32573100 | |||
|entrez_id=4712 | |entrez_id=4712 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_002493 | |nearest_refseq=NM_002493 | ||
|nearest_unigene=Hs.493668 | |nearest_unigene=Hs.493668 | ||
|num_trans=17 | |||
|species=human | |||
|start=32573074 | |||
|strand=- | |||
|transcript_name=KJ891678 | |||
|tss_classification=yes | |||
|tss_id=hg_100396.1 | |tss_id=hg_100396.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:08, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 97 |
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| Nearest PromoterID: | NM_002493 |
| Entrez ID: | 4712 |
| Nearest Unigene: | Hs.493668 |
| Nearest Refseq: | NM_002493 |
| Nearest Ensembl: | ENSG00000165264 |
| Gene Name: | NDUFB6 |
| Gene Alias: | B17 |
| Gene Description: | NADH:ubiquinone oxidoreductase subunit B6 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |