TSS: Hg 10040.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=-8431 |entrez_id=8718 |gc_percent=0.651741 |gene_alias=APO-3|DDR3|DR3|LARD|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR |gene_description=TNF...") |
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{{TSSDetail | {{TSSDetail | ||
|DDR3= | |||
|DR3= | |||
|LARD= | |||
|TNFRSF12= | |||
|TR3= | |||
|TRAMP= | |||
|WSL-1= | |||
|WSL-LR= | |||
|chr=chr1 | |||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance= | |||
|distance_to_tss=-8431 | |distance_to_tss=-8431 | ||
|end=6474644 | |||
|entrez_id=8718 | |entrez_id=8718 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
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|nearest_refseq=NM_003790 | |nearest_refseq=NM_003790 | ||
|nearest_unigene=Hs.462529 | |nearest_unigene=Hs.462529 | ||
|num_trans=0 | |||
|species=human | |||
|start=6474608 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_10040.1 | |tss_id=hg_10040.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:08, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -8431 |
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| Nearest PromoterID: | NM_148970 |
| Entrez ID: | 8718 |
| Nearest Unigene: | Hs.462529 |
| Nearest Refseq: | NM_003790 |
| Nearest Ensembl: | ENSG00000215788 |
| Gene Name: | TNFRSF25 |
| Gene Alias: | APO-3 |
| Gene Description: | TNF receptor superfamily member 25 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |