TSS: Hg 100413.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=25322 |entrez_id=3301 |gc_percent=0.40796 |gene_alias=DJ-2|DjA1|HDJ2|HSDJ|HSJ-2|HSJ2|HSPF4|NEDD7|hDJ-2 |gene_description=DnaJ h...") |
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{{TSSDetail | {{TSSDetail | ||
|DjA1= | |||
|HDJ2= | |||
|HSDJ= | |||
|HSJ-2= | |||
|HSJ2= | |||
|HSPF4= | |||
|NEDD7= | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |||
|distance_to_tss=25322 | |distance_to_tss=25322 | ||
|end=33050527 | |||
|entrez_id=3301 | |entrez_id=3301 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
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|gene_name=DNAJA1 | |gene_name=DNAJA1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hDJ-2= | |||
|nearest_ensembl=ENSG00000086061 | |nearest_ensembl=ENSG00000086061 | ||
|nearest_promoter_id=NM_001539 | |nearest_promoter_id=NM_001539 | ||
|nearest_refseq=NM_001539 | |nearest_refseq=NM_001539 | ||
|nearest_unigene=Hs.445203 | |nearest_unigene=Hs.445203 | ||
|num_trans=0 | |||
|species=human | |||
|start=33050523 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100413.1 | |tss_id=hg_100413.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:08, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 25322 |
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| Nearest PromoterID: | NM_001539 |
| Entrez ID: | 3301 |
| Nearest Unigene: | Hs.445203 |
| Nearest Refseq: | NM_001539 |
| Nearest Ensembl: | ENSG00000086061 |
| Gene Name: | DNAJA1 |
| Gene Alias: | DJ-2 |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |