TSS: Hg 100452.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=807 |entrez_id=51510 |gc_percent=0.472637 |gene_alias=C9orf83|CGI-34|HSPC177|PNAS-2|SNF7DC2|Vps60 |gene_description=charged mul...") |
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{{TSSDetail | {{TSSDetail | ||
|CGI-34= | |||
|HSPC177= | |||
|PNAS-2= | |||
|SNF7DC2= | |||
|Vps60= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=807 | |distance_to_tss=807 | ||
|end=33265691 | |||
|entrez_id=51510 | |entrez_id=51510 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
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|nearest_refseq=NM_016410 | |nearest_refseq=NM_016410 | ||
|nearest_unigene=Hs.635313 | |nearest_unigene=Hs.635313 | ||
|num_trans=0 | |||
|species=human | |||
|start=33265681 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_100452.1 | |tss_id=hg_100452.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:09, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 807 |
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| Nearest PromoterID: | NM_016410 |
| Entrez ID: | 51510 |
| Nearest Unigene: | Hs.635313 |
| Nearest Refseq: | NM_016410 |
| Nearest Ensembl: | ENSG00000086065 |
| Gene Name: | CHMP5 |
| Gene Alias: | C9orf83 |
| Gene Description: | charged multivesicular body protein 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |