TSS: Hg 100453.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=-417 |entrez_id=4799 |gc_percent=0.457711 |gene_alias=NFX2|TEG-42|Tex42 |gene_description="nuclear transcription factor, X-box b...") |
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{{TSSDetail | {{TSSDetail | ||
|TEG-42= | |||
|Tex42= | |||
|chr=chr9 | |||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance= | |||
|distance_to_tss=-417 | |distance_to_tss=-417 | ||
|end=33290002 | |||
|entrez_id=4799 | |entrez_id=4799 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_002504 | |nearest_refseq=NM_002504 | ||
|nearest_unigene=Hs.413074 | |nearest_unigene=Hs.413074 | ||
|num_trans=0 | |||
|species=human | |||
|start=33289998 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_100453.1 | |tss_id=hg_100453.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:09, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -417 |
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| Nearest PromoterID: | NM_002504 |
| Entrez ID: | 4799 |
| Nearest Unigene: | Hs.413074 |
| Nearest Refseq: | NM_002504 |
| Nearest Ensembl: | ENSG00000086102 |
| Gene Name: | NFX1 |
| Gene Alias: | NFX2 |
| Gene Description: | "nuclear transcription factor, X-box binding 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |