TSS: Hg 100535.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=2694 |entrez_id=10280 |gc_percent=0.577114 |gene_alias=ALS16|DSMA2|OPRS1|SIG-1R|SR-BP|SR-BP1|SRBP|hSigmaR1|sigma1R |gene_descriptio...") |
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{{TSSDetail | {{TSSDetail | ||
|DSMA2= | |||
|OPRS1= | |||
|SIG-1R= | |||
|SR-BP= | |||
|SR-BP1= | |||
|SRBP= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |||
|distance_to_tss=2694 | |distance_to_tss=2694 | ||
|end=34635190 | |||
|entrez_id=10280 | |entrez_id=10280 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| Line 8: | Line 17: | ||
|gene_name=SIGMAR1 | |gene_name=SIGMAR1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hSigmaR1= | |||
|nearest_ensembl=ENSG00000147955 | |nearest_ensembl=ENSG00000147955 | ||
|nearest_promoter_id=NM_001282207 | |nearest_promoter_id=NM_001282207 | ||
|nearest_refseq=NM_005866 | |nearest_refseq=NM_005866 | ||
|nearest_unigene=Hs.522087 | |nearest_unigene=Hs.522087 | ||
|num_trans=0 | |||
|sigma1R= | |||
|species=human | |||
|start=34635074 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100535.1 | |tss_id=hg_100535.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2694 |
|---|---|
| Nearest PromoterID: | NM_001282207 |
| Entrez ID: | 10280 |
| Nearest Unigene: | Hs.522087 |
| Nearest Refseq: | NM_005866 |
| Nearest Ensembl: | ENSG00000147955 |
| Gene Name: | SIGMAR1 |
| Gene Alias: | ALS16 |
| Gene Description: | sigma non-opioid intracellular receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |