TSS: Hg 100553.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=13 |entrez_id=100129969 |gc_percent=0.452736 |gene_alias=FAM205CP |gene_description=family with sequence similarity 205 member...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000603592.1:0 ENST00000340783.10:-7 NM_001309426:-7 NM_001309427:-7 ENST00000603640.6:37 | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=0 | |||
|distance_to_tss=13 | |distance_to_tss=13 | ||
|end=34895771 | |||
|entrez_id=100129969 | |entrez_id=100129969 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
|gene_alias=FAM205CP | |gene_alias=FAM205CP | ||
|gene_description=family with sequence similarity 205 member C | |gene_description=family with sequence similarity 205 member C | ||
|gene_name=FAM205C | |gene_id=100129969 | ||
|gene_name=family with sequence similarity 205 member C | |||
|gene_source=HGNC:42673 | |||
|gene_symbol=FAM205C | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:42673 | |||
|nearest_ensembl=ENSG00000187791 | |nearest_ensembl=ENSG00000187791 | ||
|nearest_promoter_id=NM_001309427 | |nearest_promoter_id=NM_001309427 | ||
|nearest_refseq=NM_001309426 | |nearest_refseq=NM_001309426 | ||
|nearest_unigene=Hs.571602 | |nearest_unigene=Hs.571602 | ||
|num_trans=5 | |||
|species=human | |||
|start=34895758 | |||
|strand=- | |||
|transcript_name=ENST00000603592.1 | |||
|tss_classification=no | |||
|tss_id=hg_100553.1 | |tss_id=hg_100553.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 13 |
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| Nearest PromoterID: | NM_001309427 |
| Entrez ID: | 100129969 |
| Nearest Unigene: | Hs.571602 |
| Nearest Refseq: | NM_001309426 |
| Nearest Ensembl: | ENSG00000187791 |
| Gene Name: | family with sequence similarity 205 member C |
| Gene Alias: | FAM205CP |
| Gene Description: | family with sequence similarity 205 member C |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.