TSS: Hg 100557.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=6775 |entrez_id=25822 |gc_percent=0.557214 |gene_alias=Hsc40 |gene_description=DnaJ heat shock protein family (Hsp40) member B5...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance= | |||
|distance_to_tss=6775 | |distance_to_tss=6775 | ||
|end=34997045 | |||
|entrez_id=25822 | |entrez_id=25822 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
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|nearest_refseq=NM_012266 | |nearest_refseq=NM_012266 | ||
|nearest_unigene=Hs.237506 | |nearest_unigene=Hs.237506 | ||
|num_trans=0 | |||
|species=human | |||
|start=34997044 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100557.1 | |tss_id=hg_100557.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 6775 |
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| Nearest PromoterID: | NM_001135005 |
| Entrez ID: | 25822 |
| Nearest Unigene: | Hs.237506 |
| Nearest Refseq: | NM_012266 |
| Nearest Ensembl: | ENSG00000137094 |
| Gene Name: | DNAJB5 |
| Gene Alias: | Hsc40 |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member B5 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |