TSS: Hg 100567.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=2 |entrez_id=84720 |gc_percent=0.676617 |gene_alias=HPMRS2 |gene_description=phosphatidylinositol glycan anchor biosynthesis cl...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000361778.6:0 ENST00000465745.6:0 ENST00000492770.1:0 NM_152850:0 uc003zwf.4:0 uc064swb.1:0 uc064swe.1:0 AK074064:0 ENST00000474436.1:8 uc003zwc.2:8 AK090433:8 NM_032634:9 NM_001201484:9 ENST00000378617.3:10 uc003zwd.4:10 AL833956:10 ENST00000472208.1:304 uc064swd.1:304 ENST00000298004.9:338 uc003zwe.4:338 BC065282:338 | |||
|chr=chr9 | |||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |||
|distance_to_tss=2 | |distance_to_tss=2 | ||
|end=35096640 | |||
|entrez_id=84720 | |entrez_id=84720 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=HPMRS2 | |gene_alias=HPMRS2 | ||
|gene_description=phosphatidylinositol glycan anchor biosynthesis class O | |gene_description=phosphatidylinositol glycan anchor biosynthesis class O | ||
|gene_name=PIGO | |gene_id=84720 | ||
|gene_name=phosphatidylinositol glycan anchor biosynthesis class O | |||
|gene_source=HGNC:23215 | |||
|gene_symbol=PIGO | |||
|gene_synonyms=DKFZp434M222 FLJ00135 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:23215 | |||
|nearest_ensembl=ENSG00000165282 | |nearest_ensembl=ENSG00000165282 | ||
|nearest_promoter_id=NM_152850 | |nearest_promoter_id=NM_152850 | ||
|nearest_refseq=NM_032634 | |nearest_refseq=NM_032634 | ||
|nearest_unigene=Hs.522099 | |nearest_unigene=Hs.522099 | ||
|num_trans=21 | |||
|species=human | |||
|start=35096557 | |||
|strand=- | |||
|transcript_name=ENST00000361778.6 ENST00000465745.6 ENST00000492770.1 NM_152850 uc003zwf.4 uc064swb.1 uc064swe.1 AK074064 | |||
|tss_classification=yes | |||
|tss_id=hg_100567.1 | |tss_id=hg_100567.1 | ||
|tss_score=1 | |||
|uniprot_id=Q8TEQ8 | |||
}} | }} |
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 2 |
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Nearest PromoterID: | NM_152850 |
Entrez ID: | 84720 |
Nearest Unigene: | Hs.522099 |
Nearest Refseq: | NM_032634 |
Nearest Ensembl: | ENSG00000165282 |
Gene Name: | phosphatidylinositol glycan anchor biosynthesis class O |
Gene Alias: | HPMRS2 |
Gene Description: | phosphatidylinositol glycan anchor biosynthesis class O |
Gene Type: | protein-coding |
CpG%: | 0.085 |
GC%: | 0.676617 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.