TSS: Hg 100582.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=350 |entrez_id=730112 |gc_percent=0.502488 |gene_alias=- |gene_description=family with sequence similarity 166 member B |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=KJ896345:-277 ENST00000492890.5:-321 uc064swu.1:-321 ENST00000619051.4:-346 ENST00000399742.6:-346 ENST00000447837.1:-346 NM_001164310:-346 NM_001287239:-346 NM_001287238:-346 NM_001099951:-346 uc064swv.1:-346 uc010mkr.4:-346 uc003zwy.4:-346 BC146928:-346 BC146933:-346 BC171840:-346 BC171851:-346 BC129999:-346 ENST00000480287.1:498 uc064sww.1:498 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-277 | |||
|distance_to_tss=350 | |distance_to_tss=350 | ||
|end=35563553 | |||
|entrez_id=730112 | |entrez_id=730112 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
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|nearest_refseq=NM_001099951 | |nearest_refseq=NM_001099951 | ||
|nearest_unigene=Hs.98959 | |nearest_unigene=Hs.98959 | ||
|num_trans=20 | |||
|species=human | |||
|start=35563544 | |||
|strand=- | |||
|transcript_name=KJ896345 | |||
|tss_classification=no | |||
|tss_id=hg_100582.1 | |tss_id=hg_100582.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:12, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 350 |
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| Nearest PromoterID: | NM_001099951 |
| Entrez ID: | 730112 |
| Nearest Unigene: | Hs.98959 |
| Nearest Refseq: | NM_001099951 |
| Nearest Ensembl: | ENSG00000215187 |
| Gene Name: | FAM166B |
| Gene Alias: | - |
| Gene Description: | family with sequence similarity 166 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |