TSS: Hg 100685.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=47029 |entrez_id=152006 |gc_percent=0.437811 |gene_alias=- |gene_description=ring finger protein 38 |gene_name=RNF38 |gene_type=pro...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |||
|distance_to_tss=47029 | |distance_to_tss=47029 | ||
|end=36353279 | |||
|entrez_id=152006 | |entrez_id=152006 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_022781 | |nearest_refseq=NM_022781 | ||
|nearest_unigene=Hs.333503 | |nearest_unigene=Hs.333503 | ||
|num_trans=0 | |||
|species=human | |||
|start=36353261 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100685.1 | |tss_id=hg_100685.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 17:14, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 47029 |
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| Nearest PromoterID: | NM_022781 |
| Entrez ID: | 152006 |
| Nearest Unigene: | Hs.333503 |
| Nearest Refseq: | NM_022781 |
| Nearest Ensembl: | ENSG00000137075 |
| Gene Name: | RNF38 |
| Gene Alias: | - |
| Gene Description: | ring finger protein 38 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |